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afni_singlesubject [2014/07/13 10:18]
pmolfese
afni_singlesubject [2014/07/13 10:19]
pmolfese
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 </​code>​ </​code>​
  
-====== Reviewing Single Subject Results ​======+===== Reviewing Single Subject Results =====
  
 uber_subject.py/​afni_proc.py will copy all of the input files into a new directory and then run processing on those files. ​ Should you want to change options and re-run, you can simply delete that results folder and start again without worrying about deleting your original files.  ​ uber_subject.py/​afni_proc.py will copy all of the input files into a new directory and then run processing on those files. ​ Should you want to change options and re-run, you can simply delete that results folder and start again without worrying about deleting your original files.  ​
  
 Inside of the results folder are a series of scripts that you should run.  The @ss_review_driver is likely the one to start with.  Launching this script will take you through a series of steps to check your data.  It will start by taking you through the censored outliers and motion, check the registration accuracy, and even pull up activation maps for inspection. ​ I highly recommend keeping a log of this information in a lab notebook or database for later reference!  ​ Inside of the results folder are a series of scripts that you should run.  The @ss_review_driver is likely the one to start with.  Launching this script will take you through a series of steps to check your data.  It will start by taking you through the censored outliers and motion, check the registration accuracy, and even pull up activation maps for inspection. ​ I highly recommend keeping a log of this information in a lab notebook or database for later reference!  ​
afni_singlesubject.txt ยท Last modified: 2014/07/13 10:19 by pmolfese